Programming and Plotting in Python

Key Points

Running and Quitting
  • Python programs are plain text files.

  • Use the Jupyter Notebook for editing and running Python.

  • The Notebook has Command and Edit modes.

  • Use the keyboard and mouse to select and edit cells.

  • The Notebook will turn Markdown into pretty-printed documentation.

  • Markdown does most of what HTML does.

Data Types and Type Conversion
  • Every value has a type.

  • Use the built-in function type to find the type of a value.

  • Types control what operations can be done on values.

  • Strings can be added and multiplied.

  • Strings have a length (but numbers don’t).

  • Must convert numbers to strings or vice versa when operating on them.

  • Can mix integers and floats freely in operations.

  • Variables only change value when something is assigned to them.

Built-in Functions and Help
  • Use comments to add documentation to programs.

  • A function may take zero or more arguments.

  • Commonly-used built-in functions include max, min, and round.

  • Functions may only work for certain (combinations of) arguments.

  • Functions may have default values for some arguments.

  • Use the built-in function help to get help for a function.

  • The Jupyter Notebook has two ways to get help.

  • Every function returns something.

  • Python reports a syntax error when it can’t understand the source of a program.

  • Python reports a runtime error when something goes wrong while a program is executing.

  • Fix syntax errors by reading the source code, and runtime errors by tracing the program’s execution.

Libraries
  • Most of the power of a programming language is in its libraries.

  • A program must import a library module in order to use it.

  • Use help to learn about the contents of a library module.

  • Import specific items from a library to shorten programs.

  • Create an alias for a library when importing it to shorten programs.

Reading Tabular Data into DataFrames
  • Use the Pandas library to get basic statistics out of tabular data.

  • Use index_col to specify that a column’s values should be used as row headings.

  • Use DataFrame.info to find out more about a dataframe.

  • The DataFrame.columns variable stores information about the dataframe’s columns.

  • Use DataFrame.T to transpose a dataframe.

  • Use DataFrame.describe to get summary statistics about data.

Pandas DataFrames
  • Use DataFrame.iloc[..., ...] to select values by integer location.

  • Use : on its own to mean all columns or all rows.

  • Select multiple columns or rows using DataFrame.loc and a named slice.

  • Result of slicing can be used in further operations.

  • Use comparisons to select data based on value.

  • Select values or NaN using a Boolean mask.

Plotting
  • matplotlib is the most widely used scientific plotting library in Python.

  • Plot data directly from a Pandas dataframe.

  • Select and transform data, then plot it.

  • Many styles of plot are available.

  • Can plot many sets of data together.

Looping Over Data Sets
  • Use a for loop to process files given a list of their names.

  • Use glob.glob to find sets of files whose names match a pattern.

  • Use glob and for to process batches of files.

Writing Functions
  • Break programs down into functions to make them easier to understand.

  • Define a function using def with a name, parameters, and a block of code.

  • Defining a function does not run it.

  • Arguments in call are matched to parameters in definition.

  • Functions may return a result to their caller using return.

Wrap-Up
  • Python supports a large community within and outwith research.

FIXME: more reference material.

Glossary

FIXME: glossary.